Publications

2017

Sensoy, Ozge; Almeida, Jose G; Shabbir, Javeria; Moreira, Irina S; Morra, Giulia

Computational studies of G protein-coupled receptor complexes: Structure and dynamics Book Chapter

Elsevier, 2017, ISSN: 0091-679X.

Abstract | Links | BibTeX

Penkler, David; Sensoy, Ozge; Atilgan, Canan; Bishop, Ozlem Tastan

Perturbation Response Scanning Reveals Key Residues for Allosteric Control in Hsp70 Journal Article

Journal of Chemical Modeling and Information, 57 (6), pp. 1359–1374, 2017.

Abstract | Links | BibTeX

Sensoy, Ozge; Atilgan, Ali Rana; Atilgan, Canan

FbpA iron storage and release are governed by periplasmic microenvironments Journal Article

Phys. Chem. Chem. Phys., 19 , pp. 6064-6075, 2017.

Abstract | Links | BibTeX

2016

Sensoy, Ozge ; Moreira, Irina S; Morra, Giulia

Understanding the Differential Selectivity of Arrestins toward the Phosphorylation State of the Receptor Journal Article

ACS Chemical Neuroscience, 7 (9), pp. 1212-1224, 2016.

Abstract | Links | BibTeX

M, Arango-Lievano; O, Sensoy; A, Borie; M, Corbani; G, Guillon; P, Sokoloff; H, Weinstein; F, Jeanneteau

A GIPC1-Palmitate Switch Modulates Dopamine Drd3 Receptor Trafficking and Signaling Journal Article

Mol Cell Biology, 36 (6), pp. 1019-1031, 2016.

Abstract | Links | BibTeX

2015

Sensoy, Ozge; Weinstein, Harel

A mechanistic role of Helix 8 in GPCRs: Computational modeling of the dopamine D2 receptor interaction with the GIPC1-PDZ-domain Journal Article

Biochimica et Biophysica Acta (BBA) - Biomembranes, 1848 (4), pp. 976 - 983, 2015.

Abstract | Links | BibTeX

2013

Dalgicdir, Cahit; Sensoy, Ozge; Peter, Christine; Sayar, Mehmet

A transferable coarse-grained model for diphenylalanine: how to represent an environment driven conformational transition Journal Article

The Journal of Chemical Physics, 139 (23), pp. 234115, 2013.

Abstract | Links | BibTeX

Bakota, Erica L; Sensoy, Ozge ; Ozgur, Beytullah ; Sayar, Mehmet ; Hartgerink, Jeffrey D

Self-Assembling Multidomain Peptide Fibers with Aromatic Cores Journal Article

Biomacromolecules, 14 (5), pp. 1370-1378, 2013.

Abstract | Links | BibTeX

2012

Engin, Ozge ; Sayar, Mehmet

Adsorption, Folding, and Packing of an Amphiphilic Peptide at the Air/Water Interface Journal Article

The Journal of Physical Chemistry B, 116 (7), pp. 2198-2207, 2012.

Abstract | Links | BibTeX

2011

Engin, Ozge ; Villa, Alessandra ; Peter, Christine ; Sayar, Mehmet

A Challenge for Peptide Coarse Graining:Transferability of Fragment-Based Models Journal Article

Macromolecular Theory and Simulations, 20 (7), pp. 451–465, 2011.

Abstract | Links | BibTeX

2010

Engin, Ozge ; Villa, Alessandra ; Sayar, Mehmet ; Hess, Berk

Driving forces for adsorption of amphiphilic peptides to the air-water interface Journal Article

The Journal of Physical Chemistry B, 114 (34), pp. 11093-11101, 2010.

Abstract | Links | BibTeX

2009

Engin, Ozge; Sayar, Mehmet; Erman, Burak

The introduction of hydrogen bond and hydrophobicity effects into the rotational isomeric states model for conformational analysis of unfolded peptides. Journal Article

Physical Biology, 6 (1), pp. 016001, 2009.

Abstract | Links | BibTeX